ObMiTi
This is the development version of ObMiTi; for the stable release version, see ObMiTi.
Ob/ob Mice Data on Normal and High Fat Diet
Bioconductor version: Development (3.21)
The package provide RNA-seq count for 2 strains of mus musclus; Wild type and Ob/Ob. Each strain was divided into two groups, and each group received either chow diet or high fat diet. RNA expression was measured after 20 weeks in 7 tissues.
Author: Omar Elashkar [aut, cre] (ORCID:
Maintainer: Omar Elashkar <omar.i.elashkar at gmail.com>
citation("ObMiTi")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("ObMiTi")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ObMiTi")| Using ObMiTi | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | ExperimentData, ExperimentHub, GEO, RNASeqData |
| Version | 1.13.0 |
| License | GPL-3 |
| Depends | R (>= 4.1), SummarizedExperiment, ExperimentHub |
| Imports | |
| System Requirements | |
| URL | https://github.com/OmarElAshkar/ObMiTi |
| Bug Reports | https://github.com/OmarElAshkar/ObMiTi/issues |
See More
| Suggests | knitr, rmarkdown, BiocManager, GenomicFeatures, S4Vectors, devtools, testthat |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | ObMiTi_1.13.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/ObMiTi |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ObMiTi |
| Package Short Url | https://bioconductor.org/packages/ObMiTi/ |
| Package Downloads Report | Download Stats |