JASPAR2016
This is the development version of JASPAR2016; for the stable release version, see JASPAR2016.
Data package for JASPAR 2016
Bioconductor version: Development (3.21)
Data package for JASPAR 2016. To search this databases, please use the package TFBSTools (>= 1.8.1).
Author: Ge Tan <ge_tan at live.com>
Maintainer: Ge Tan <ge_tan at live.com>
Citation (from within R, enter
citation("JASPAR2016")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("JASPAR2016")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | ExperimentData, GeneRegulation, MotifAnnotation |
| Version | 1.35.0 |
| License | GPL-2 |
| Depends | R (>= 3.2.2), methods |
| Imports | |
| System Requirements | |
| URL | http://jaspar.genereg.net/ |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | chromVAR, TFBSTools, CAGEWorkflow |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | JASPAR2016_1.35.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/JASPAR2016 |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/JASPAR2016 |
| Package Short Url | https://bioconductor.org/packages/JASPAR2016/ |
| Package Downloads Report | Download Stats |