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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ProCoNA")
In most cases, you don't need to download the package archive at all.
ProCoNA
|
This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see ProCoNA.
Protein co-expression network analysis (ProCoNA).
Bioconductor version: 3.0
Protein co-expression network construction using peptide level data, with statisical analysis. (Journal of Clinical Bioinformatics 2013, 3:11 doi:10.1186/2043-9113-3-11)
Author: David L Gibbs
Maintainer: David L Gibbs <gibbsd at ohsu.edu>
Citation (from within R,
enter citation("ProCoNA")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ProCoNA")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ProCoNA")
| R Script | De Novo Peptide Network Example | |
| Reference Manual | ||
| Text | README | |
| Text | NEWS |
Details
| biocViews | GraphAndNetwork, Proteomics, Software |
| Version | 1.4.1 |
| In Bioconductor since | BioC 2.13 (R-3.0) (2.5 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.10), methods, WGCNA, MSnbase, flashClust |
| Imports | BiocGenerics, GOstats |
| LinkingTo | |
| Suggests | RUnit |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | ProCoNA_1.4.1.tar.gz |
| Windows Binary | ProCoNA_1.4.1.zip |
| Mac OS X 10.6 (Snow Leopard) | ProCoNA_1.4.1.tgz |
| Mac OS X 10.9 (Mavericks) | ProCoNA_1.4.1.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/ProCoNA/tree/release-3.0 |
| Package Short Url | http://bioconductor.org/packages/ProCoNA/ |
| Package Downloads Report | Download Stats |
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