To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BRAIN")
In most cases, you don't need to download the package archive at all.
BRAIN
|
This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see BRAIN.
Baffling Recursive Algorithm for Isotope distributioN calculations
Bioconductor version: 3.0
Package for calculating aggregated isotopic distribution and exact center-masses for chemical substances (in this version composed of C, H, N, O and S). This is an implementation of the BRAIN algorithm described in the paper by J. Claesen, P. Dittwald, T. Burzykowski and D. Valkenborg.
Author: Piotr Dittwald, with contributions of Dirk Valkenborg and Jurgen Claesen
Maintainer: Piotr Dittwald <piotr.dittwald at mimuw.edu.pl>
Citation (from within R,
enter citation("BRAIN")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BRAIN")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BRAIN")
| R Script | BRAIN Usage | |
| Reference Manual |
Details
| biocViews | MassSpectrometry, Proteomics, Software |
| Version | 1.12.0 |
| In Bioconductor since | BioC 2.10 (R-2.15) (4 years) |
| License | GPL-2 |
| Depends | R (>= 2.8.1), PolynomF, Biostrings, lattice |
| Imports | |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | cleaver, RforProteomics |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | BRAIN_1.12.0.tar.gz |
| Windows Binary | BRAIN_1.12.0.zip |
| Mac OS X 10.6 (Snow Leopard) | BRAIN_1.12.0.tgz |
| Mac OS X 10.9 (Mavericks) | BRAIN_1.12.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/BRAIN/tree/release-3.0 |
| Package Short Url | http://bioconductor.org/packages/BRAIN/ |
| Package Downloads Report | Download Stats |
Documentation »
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